HG-MD  1
StatisticsVector< T > Member List
This is the complete list of members for StatisticsVector< T >, including all inherited members.
actions_after_solve()MD [inline, protected, virtual]
actions_after_time_step()MD [inline, protected, virtual]
actions_before_time_loop()MD [inline, protected, virtual]
actions_before_time_step()MD [inline, protected, virtual]
add_ene_ela(Mdouble new_)MD [inline]
add_Species(CSpecies &S)MD
add_Species(void)MD [inline]
auto_number()STD_save [inline]
average(vector< StatisticsPoint< T > > &P)StatisticsVector< T >
broad_phase(Particle *i)MD [inline, protected, virtual]
CG_typeStatisticsVector< T > [private]
check_current_time_for_statistics()StatisticsVector< T > [inline]
compute_all_forces()MD [protected, virtual]
compute_external_forces(Particle *PI)MD [protected, virtual]
compute_internal_forces(Particle *i)MD [protected, virtual]
compute_internal_forces(Particle *P1, Particle *P2)MD [protected, virtual]
compute_particle_masses()MD [inline, protected]
compute_plastic_internal_forces(Particle *P1, Particle *P2)MD [protected]
compute_walls(Particle *PI)MD [protected, virtual]
constructor()StatisticsVector< T >
constructor(string name)StatisticsVector< T >
continue_solve()MD [inline, protected, virtual]
cout_time()MD [inline, protected, virtual]
create_xballs_script()MD [virtual]
cutoffStatisticsVector< T > [private]
cutoff2StatisticsVector< T > [private]
data_fileSTD_save [protected]
data_filenameSTD_save [protected]
do_integration_after_force_computation(Particle *pI)MD [protected, virtual]
do_integration_before_force_computation(Particle *pI)MD [protected, virtual]
doGradientStatisticsVector< T > [private]
doTimeAverageStatisticsVector< T > [private]
doVarianceStatisticsVector< T > [private]
dxStatisticsVector< T > [private]
dxTimeAverageStatisticsVector< T > [private]
dyStatisticsVector< T > [private]
dyTimeAverageStatisticsVector< T > [private]
dzStatisticsVector< T > [private]
dzTimeAverageStatisticsVector< T > [private]
ene_fileSTD_save [protected]
ene_filenameSTD_save [protected]
evaluate_force_statistics(int wp=0)StatisticsVector< T >
evaluate_particle_statistics(vector< Particle * >::iterator P, int wp=0)StatisticsVector< T >
evaluate_wall_force_statistics(Vec3D P, int wp=0)StatisticsVector< T >
evaluateIntegral(Mdouble n1, Mdouble n2, Mdouble t)StatisticsVector< T > [inline]
evaluatePolynomial(Mdouble r)StatisticsVector< T > [inline]
file_counterSTD_save [protected]
FileExists(std::string strFilename)STD_save
find_next_data_file(Mdouble tmin, bool verbose=true)MD
finish_statistics()StatisticsVector< T > [virtual]
formatStatisticsVector< T > [private]
fstat_fileSTD_save [protected]
fstat_filenameSTD_save [protected]
fstat_header()MD [protected, virtual]
gather_force_statistics_from_fstat_and_data()StatisticsVector< T >
gather_statistics_collision(int index1, int index2, Vec3D Contact, Mdouble delta, Mdouble ctheta, Mdouble fdotn, Mdouble fdott, Vec3D P1_P2_normal_, Vec3D P1_P2_tangential)StatisticsVector< T > [virtual]
get_append()MD [inline]
get_CG_type()StatisticsVector< T > [inline]
get_collision_time(Mdouble mass, unsigned int indSpecies=0)MD [inline]
get_counter()STD_save
get_cutoff()StatisticsVector< T > [inline]
get_cutoff2()StatisticsVector< T > [inline]
get_data_file()STD_save [inline]
get_data_filename()STD_save [inline]
get_depth(unsigned int indSpecies=0)MD [inline]
get_dim()MD [inline]
get_dim_particle(unsigned int indSpecies=0)MD [inline]
get_disp(unsigned int indSpecies=0)MD [inline]
get_disprolling(unsigned int indSpecies=0)MD [inline]
get_dispt(unsigned int indSpecies=0)MD [inline]
get_disptorsion(unsigned int indSpecies=0)MD [inline]
get_dissipation(unsigned int indSpecies=0)MD [inline]
get_do_stat_always()MD [inline]
get_doGradient()StatisticsVector< T > [inline]
get_doTimeAverage()StatisticsVector< T > [inline]
get_doVariance()StatisticsVector< T > [inline]
get_dt()MD [inline]
get_ene_ela()MD [inline]
get_ene_file()STD_save [inline]
get_ene_filename()STD_save [inline]
get_file_counter()STD_save [inline]
get_fstat_file()STD_save [inline]
get_fstat_filename()STD_save [inline]
get_gravity()MD [inline]
get_Hertzian()MD [inline]
get_HGRID_UpdateEachTimeStep()MD [inline, protected, virtual]
get_ignoreFixedParticles()StatisticsVector< T > [inline]
get_k(int indSpecies=0)MD [inline]
get_k1(unsigned int indSpecies=0)MD [inline]
get_k2max(unsigned int indSpecies=0)MD [inline]
get_kc(unsigned int indSpecies=0)MD [inline]
get_krolling(int indSpecies=0)MD [inline]
get_kt(int indSpecies=0)MD [inline]
get_ktorsion(int indSpecies=0)MD [inline]
get_LargestParticle()MD [inline, virtual]
get_Mass_from_Radius(Mdouble radius, int indSpecies=0)MD [inline]
get_max_radius()MD [inline]
get_maximum_velocity(Particle &P)MD [inline]
get_maximum_velocity()MD [inline]
get_mirrorAtDomainBoundary()StatisticsVector< T > [inline]
get_MixedSpecies(int i, int j)MD [inline]
get_mu(unsigned int indSpecies=0)MD [inline]
get_murolling(unsigned int indSpecies=0)MD [inline]
get_mutorsion(unsigned int indSpecies=0)MD [inline]
get_n(int &nx_, int &ny_, int &nz_)StatisticsVector< T > [inline]
get_name()STD_save [inline]
get_NSpecies()MD [inline]
get_nTimeAverage()StatisticsVector< T > [inline]
get_numbers(int size_x, int size_y)STD_save
get_NWall()MD [inline]
get_NWallPeriodic()MD [inline]
get_nx()StatisticsVector< T > [inline]
get_ny()StatisticsVector< T > [inline]
get_nz()StatisticsVector< T > [inline]
get_options_data(void)STD_save [inline]
get_options_ene(void)STD_save [inline]
get_options_fstat(void)STD_save [inline]
get_options_restart(void)STD_save [inline]
get_options_stat(void)STD_save [inline]
get_ParticleHandler()MD [inline]
get_periodicWalls()StatisticsVector< T > [inline]
get_plastic_dt(Mdouble mass, unsigned int indSpecies=0)MD [inline]
get_Points()StatisticsVector< T > [inline]
get_PolynomialName()StatisticsVector< T > [inline]
get_restart_version()MD [inline]
get_restarted()MD [inline]
get_restitution_coefficient(Mdouble mass, unsigned int indSpecies=0)MD [inline]
get_rho(int indSpecies=0)MD [inline]
get_save_count()MD [inline]
get_save_count_data()MD [inline]
get_save_count_ene()MD [inline]
get_save_count_fstat()MD [inline]
get_save_count_stat()MD [inline]
get_save_data_data()MD [inline]
get_save_data_ene()MD [inline]
get_save_data_fstat()MD [inline]
get_save_data_stat()MD [inline]
get_savecount()MD [inline]
get_SmallestParticle()MD [inline, virtual]
get_Species(void)MD [inline]
get_Species(int i)MD [inline]
get_stat_file()STD_save [inline]
get_stat_filename()STD_save [inline]
get_step_size()STD_save [inline]
get_StressTypeForFixedParticles()StatisticsVector< T > [inline]
get_superexact()StatisticsVector< T > [inline]
get_t()MD [inline]
get_tintStat()StatisticsVector< T > [inline]
get_tmax()MD [inline]
get_tmaxStat()StatisticsVector< T > [inline]
get_tminStat()StatisticsVector< T > [inline]
get_verbosity()StatisticsVector< T > [inline]
get_w()StatisticsVector< T > [inline]
get_w2()StatisticsVector< T > [inline]
get_w_over_rmax()StatisticsVector< T > [inline]
get_Walls(void)MD [inline]
get_Walls(int i)MD [inline]
get_walls()StatisticsVector< T > [inline]
get_WallsPeriodic(void)MD [inline]
get_WallsPeriodic(int i)MD [inline]
get_xballs_additional_arguments()MD [inline]
get_xballs_cmode()MD [inline]
get_xballs_scale()MD [inline]
get_xballs_vscale()MD [inline]
get_xmax()MD [inline]
get_xmaxStat()StatisticsVector< T > [inline]
get_xmin()MD [inline]
get_xminStat()StatisticsVector< T > [inline]
get_ymax()MD [inline]
get_ymaxStat()StatisticsVector< T > [inline]
get_ymin()MD [inline]
get_yminStat()StatisticsVector< T > [inline]
get_zmax()MD [inline]
get_zmaxStat()StatisticsVector< T > [inline]
get_zmin()MD [inline]
get_zminStat()StatisticsVector< T > [inline]
getInfo(Particle &P UNUSED)MD [inline, virtual]
HGRID_actions_after_integration()MD [inline, protected, virtual]
HGRID_actions_before_integration()MD [inline, protected, virtual]
HGRID_actions_before_time_loop()MD [inline, protected, virtual]
HGRID_actions_before_time_step()MD [inline, protected, virtual]
HGRID_InsertParticleToHgrid(Particle *obj UNUSED)MD [inline, protected, virtual]
HGRID_RemoveParticleFromHgrid(Particle *obj UNUSED)MD [inline, protected, virtual]
HGRID_update_move(Particle *, Mdouble)MD [inline, protected, virtual]
HGRID_UpdateParticleInHgrid(Particle *obj UNUSED)MD [inline, protected, virtual]
hmaxStatisticsVector< T > [private]
ignoreFixedParticlesStatisticsVector< T > [private]
inc_counter_in_file()STD_save
increase_counter_data(fstream::openmode mode)STD_save [inline]
increase_counter_ene(fstream::openmode mode)STD_save [inline]
increase_counter_fstat(fstream::openmode mode)STD_save [inline]
increase_counter_stat(fstream::openmode mode)STD_save [inline]
indSpeciesStatisticsVector< T > [private]
info()MD [inline, virtual]
InitBroadPhase()MD [inline, protected, virtual]
initialize_statistics()StatisticsVector< T > [virtual]
initialize_tangential_springs()MD [protected]
isMDCLRStatisticsVector< T > [private]
jump_fstat()StatisticsVector< T >
launch_new(const char *name, bool quick=false)STD_save
load_from_data_file(const char *filename, unsigned int format=0)MD
load_par_ini_file(const char *filename)MD
load_restart_data()MD
load_restart_data(string filename)MD
MD()MD [inline]
MD(STD_save &other)MD [inline]
mirrorAtDomainBoundaryStatisticsVector< T > [private]
nTimeAverageStatisticsVector< T > [private]
nTimeAverageResetStatisticsVector< T > [private]
nxStatisticsVector< T > [private]
nxMirroredStatisticsVector< T > [private]
nyStatisticsVector< T > [private]
nyMirroredStatisticsVector< T > [private]
nzStatisticsVector< T > [private]
nzMirroredStatisticsVector< T > [private]
open_counted_file(fstream &file, string filenameNoCount, fstream::openmode mode)STD_save [inline]
open_data_file(fstream::openmode mode=fstream::out)STD_save [inline]
open_ene_file(fstream::openmode mode=fstream::out)STD_save [inline]
open_file(fstream &file, string filename, unsigned int options, fstream::openmode mode)STD_save [inline]
open_fstat_file(fstream::openmode mode=fstream::out)STD_save [inline]
open_stat_file(fstream::openmode mode=fstream::out)STD_save [inline]
operator<<(std::ostream &os, MD &md)MD [friend]
options_dataSTD_save [protected]
options_eneSTD_save [protected]
options_fstatSTD_save [protected]
options_restartSTD_save [protected]
options_statSTD_save [protected]
output_ene()MD [protected, virtual]
output_statistics()StatisticsVector< T > [virtual]
output_xballs_data()MD [protected, virtual]
output_xballs_data_particle(int i)MD [protected, virtual]
P1StatisticsVector< T > [private]
P1_P2_CollisionalHeatFluxStatisticsVector< T > [private]
P1_P2_DissipationStatisticsVector< T > [private]
P1_P2_distanceStatisticsVector< T > [private]
P1_P2_FabricStatisticsVector< T > [private]
P1_P2_normalStatisticsVector< T > [private]
P1_P2_NormalStressStatisticsVector< T > [private]
P1_P2_NormalTractionStatisticsVector< T > [private]
P1_P2_PotentialStatisticsVector< T > [private]
P1_P2_TangentialStressStatisticsVector< T > [private]
P1_P2_TangentialTractionStatisticsVector< T > [private]
P2StatisticsVector< T > [private]
periodicWallsStatisticsVector< T > [private]
PointsStatisticsVector< T > [private]
PolynomialStatisticsVector< T > [private]
print()StatisticsVector< T >
MD::print(std::ostream &os, bool print_all=false)MD [virtual]
print_CG()StatisticsVector< T >
print_help()StatisticsVector< T >
problem_nameSTD_save [protected]
process_statistics(bool usethese)StatisticsVector< T > [virtual]
randomMD
read(std::istream &is)MD [virtual]
read_dim_from_data_file()MD
read_next_from_data_file(unsigned int format)StatisticsVector< T >
read_run_num_from_file()STD_save
read_v1(std::istream &is)MD [virtual]
read_v2(std::istream &is)MD [virtual]
readArguments(unsigned int argc, char *argv[])MD
readNextArgument(unsigned int &i, unsigned int argc, char *argv[])MD [virtual]
readStatArguments(unsigned int argc, char *argv[])StatisticsVector< T >
Remove_Particle(int IP)MD
removeParticle(int iP)MD [inline, virtual]
reset_DeltaMax()MD [inline, protected]
reset_statistics()StatisticsVector< T >
reset_TangentialSprings()MD [inline, protected]
rmaxStatisticsVector< T > [private]
rminStatisticsVector< T > [private]
save_info_to_disk()STD_save
save_restart_data()MD [virtual]
set_append(bool new_)MD [inline]
set_CG_type(const char *new_)StatisticsVector< T >
set_CG_type(CG new_)StatisticsVector< T >
set_collision_time_and_normal_and_tangential_restitution_coefficient(Mdouble tc, Mdouble eps, Mdouble beta, Mdouble mass1, Mdouble mass2, unsigned int indSpecies=0)MD [inline]
set_collision_time_and_normal_and_tangential_restitution_coefficient_nodispt(Mdouble tc, Mdouble eps, Mdouble beta, Mdouble mass1, Mdouble mass2, unsigned int indSpecies=0)MD [inline]
set_collision_time_and_restitution_coefficient(Mdouble tc, Mdouble eps, Mdouble mass, unsigned int indSpecies=0)MD [inline]
set_collision_time_and_restitution_coefficient(Mdouble tc, Mdouble eps, Mdouble mass1, Mdouble mass2, unsigned int indSpecies=0)MD [inline]
set_counter(int new_counter)STD_save
set_counter_from_file()STD_save
set_data_filename(string filename)STD_save [inline]
set_data_filename()STD_save [inline]
set_depth(Mdouble new_, unsigned int indSpecies=0)MD [inline]
set_dim(int new_dim)MD [inline]
set_dim_particle(int new_, unsigned int indSpecies=0)MD [inline]
set_disp(Mdouble new_, unsigned int indSpecies=0)MD [inline]
set_disprolling(Mdouble new_, unsigned int indSpecies=0)MD [inline]
set_dispt(Mdouble new_, unsigned int indSpecies=0)MD [inline]
set_disptorsion(Mdouble new_, unsigned int indSpecies=0)MD [inline]
set_dissipation(Mdouble new_, unsigned int indSpecies=0)MD [inline]
set_do_stat_always(bool new_)MD [inline]
set_doGradient(bool new_)StatisticsVector< T > [inline]
set_doTimeAverage(bool new_)StatisticsVector< T > [inline]
set_doVariance(bool new_)StatisticsVector< T > [inline]
set_dt(Mdouble new_dt)MD [inline]
set_dt(Particle &P)MD [inline]
set_dt()MD [inline]
set_dt_by_mass(Mdouble mass)MD [inline]
set_ene_ela(Mdouble new_)MD [inline]
set_ene_filename(string filename)STD_save [inline]
set_ene_filename()STD_save [inline]
set_file_counter(int new_)STD_save [inline]
set_FixedParticles(unsigned int n)MD [inline, protected]
set_format(int new_)MD [inline]
set_fstat_filename(string filename)STD_save [inline]
set_fstat_filename()STD_save [inline]
set_gravity(Vec3D new_gravity)MD [inline]
set_h(Mdouble h)StatisticsVector< T > [inline]
set_Hertzian(bool new_)MD [inline]
set_hmax(Mdouble new_)StatisticsVector< T > [inline]
set_hx(Mdouble hx)StatisticsVector< T > [inline]
set_hy(Mdouble hy)StatisticsVector< T > [inline]
set_hz(Mdouble hz)StatisticsVector< T > [inline]
set_ignoreFixedParticles(bool new_)StatisticsVector< T > [inline]
set_infiniteStressForFixedParticles(bool new_)StatisticsVector< T > [inline]
set_initial_pressures_for_pressure_controlled_walls()MD [inline, protected, virtual]
set_k(Mdouble new_, unsigned int indSpecies=0)MD [inline]
set_k1(Mdouble new_, unsigned int indSpecies=0)MD [inline]
set_k2max(Mdouble new_, unsigned int indSpecies=0)MD [inline]
set_k_and_restitution_coefficient(Mdouble k_, Mdouble eps, Mdouble mass, unsigned int indSpecies=0)MD [inline]
set_kc(Mdouble new_, unsigned int indSpecies=0)MD [inline]
set_krolling(Mdouble new_, unsigned int indSpecies=0)MD [inline]
set_kt(Mdouble new_, unsigned int indSpecies=0)MD [inline]
set_ktorsion(Mdouble new_, unsigned int indSpecies=0)MD [inline]
set_mirrorAtDomainBoundary(Mdouble new_)StatisticsVector< T > [inline]
set_MixedSpecies(int i, int j, CSpecies &S)MD [inline]
set_mu(Mdouble new_, unsigned int indSpecies=0)MD [inline]
set_murolling(Mdouble new_, unsigned int indSpecies=0)MD [inline]
set_mutorsion(Mdouble new_, unsigned int indSpecies=0)MD [inline]
set_n(int n)StatisticsVector< T > [inline]
set_n(int nx_, int ny_, int nz_)StatisticsVector< T > [inline]
set_name(const char *name)MD [inline]
set_number_of_saves(Mdouble N)MD [inline]
set_number_of_saves_all(Mdouble N)MD [inline]
set_number_of_saves_data(Mdouble N)MD [inline]
set_number_of_saves_ene(Mdouble N)MD [inline]
set_number_of_saves_fstat(Mdouble N)MD [inline]
set_number_of_saves_stat(Mdouble N)MD [inline]
set_NWall(int N)MD [inline]
set_NWallPeriodic(int N)MD [inline]
set_nx(int new_)StatisticsVector< T > [inline]
set_nx(int new_ UNUSED)StatisticsVector< T >
set_nx(int new_ UNUSED)StatisticsVector< T >
set_nx(int new_ UNUSED)StatisticsVector< T >
set_nx(int new_ UNUSED)StatisticsVector< T >
set_ny(int new_)StatisticsVector< T > [inline]
set_ny(int new_ UNUSED)StatisticsVector< T >
set_ny(int new_ UNUSED)StatisticsVector< T >
set_ny(int new_ UNUSED)StatisticsVector< T >
set_ny(int new_ UNUSED)StatisticsVector< T >
set_nz(int new_)StatisticsVector< T > [inline]
set_nz(int new_ UNUSED)StatisticsVector< T >
set_nz(int new_ UNUSED)StatisticsVector< T >
set_nz(int new_ UNUSED)StatisticsVector< T >
set_nz(int new_ UNUSED)StatisticsVector< T >
set_options_data(unsigned int new_)STD_save [inline]
set_options_ene(unsigned int new_)STD_save [inline]
set_options_fstat(unsigned int new_)STD_save [inline]
set_options_restart(unsigned int new_)STD_save [inline]
set_options_stat(unsigned int new_)STD_save [inline]
set_periodicWalls(bool new_)StatisticsVector< T > [inline]
set_plastic_k1_k2max_kc_depth(Mdouble k1_, Mdouble k2max_, Mdouble kc_, Mdouble depth_, unsigned int indSpecies=0)MD [inline]
set_Polynomial(vector< Mdouble > new_coefficients, unsigned int new_dim)StatisticsVector< T > [inline]
set_Polynomial(Mdouble *new_coefficients, unsigned int num_coeff, unsigned int new_dim)StatisticsVector< T > [inline]
set_PolynomialName(const char *new_name)StatisticsVector< T > [inline]
set_Positions()StatisticsVector< T >
set_restart_version(int new_)MD [inline]
set_restarted(bool new_)MD [inline]
set_rho(Mdouble new_, unsigned int indSpecies=0)MD [inline]
set_rmax(Mdouble new_)StatisticsVector< T > [inline]
set_rmin(Mdouble new_)StatisticsVector< T > [inline]
set_save_count_all(int new_)MD [inline]
set_save_count_data(int new_)MD [inline]
set_save_count_ene(int new_)MD [inline]
set_save_count_fstat(int new_)MD [inline]
set_save_count_stat(int new_)MD [inline]
set_savecount(int new_)MD [inline]
set_stat_filename(string filename)STD_save [inline]
set_stat_filename()STD_save [inline]
set_statType()StatisticsVector< T >
set_statType()StatisticsVector< T >
set_statType()StatisticsVector< T >
set_statType()StatisticsVector< T >
set_statType()StatisticsVector< T >
set_statType()StatisticsVector< T >
set_statType()StatisticsVector< T >
set_statType()StatisticsVector< T >
set_statType()StatisticsVector< T >
set_step_size(unsigned int new_)STD_save [inline]
set_StressTypeForFixedParticles(int new_)StatisticsVector< T > [inline]
set_superexact(bool new_)StatisticsVector< T > [inline]
set_t(Mdouble new_t)MD [inline]
set_tintStat(Mdouble t)StatisticsVector< T > [inline]
set_tmax(Mdouble new_tmax)MD [inline]
set_tmaxStat(Mdouble t)StatisticsVector< T > [inline]
set_tminStat(Mdouble t)StatisticsVector< T > [inline]
set_verbosity(int new_)StatisticsVector< T > [inline]
set_w(Mdouble w)StatisticsVector< T > [inline]
set_w2(Mdouble new_)StatisticsVector< T >
set_w_over_rmax(Mdouble new_)StatisticsVector< T > [inline]
set_walls(bool new_)StatisticsVector< T > [inline]
set_xballs_additional_arguments(string new_)MD [inline]
set_xballs_cmode(int new_cmode)MD [inline]
set_xballs_colour_mode(int new_cmode)MD [inline]
set_xballs_scale(Mdouble new_scale)MD [inline]
set_xballs_vector_scale(double new_vscale)MD [inline]
set_xmax(Mdouble new_xmax)MD [inline]
set_xmaxStat(Mdouble xmaxStat_)StatisticsVector< T > [inline]
set_xmin(Mdouble new_xmin)MD [inline]
set_xminStat(Mdouble xminStat_)StatisticsVector< T > [inline]
set_ymax(Mdouble new_ymax)MD [inline]
set_ymaxStat(Mdouble ymaxStat_)StatisticsVector< T > [inline]
set_ymin(Mdouble new_ymin)MD [inline]
set_yminStat(Mdouble yminStat_)StatisticsVector< T > [inline]
set_zmax(Mdouble new_zmax)MD [inline]
set_zmaxStat(Mdouble zmaxStat_)StatisticsVector< T > [inline]
set_zmin(Mdouble new_zmin)MD [inline]
set_zminStat(Mdouble zminStat_)StatisticsVector< T > [inline]
setInfinitelyLongDistance()StatisticsVector< T >
setInfinitelyLongDistance()StatisticsVector< T >
setInfinitelyLongDistance()StatisticsVector< T >
setInfinitelyLongDistance()StatisticsVector< T >
setInfinitelyLongDistance()StatisticsVector< T >
setInfinitelyLongDistance()StatisticsVector< T >
setInfinitelyLongDistance()StatisticsVector< T >
setInfinitelyLongDistance()StatisticsVector< T >
setInfinitelyLongDistance()StatisticsVector< T >
setup_particles_initial_conditions()MD [virtual]
solve()MD
solve(unsigned int argc, char *argv[])MD [inline]
solveWithMDCLR()MD
SpeciesMD [protected]
start_ene()MD [protected, virtual]
stat_fileSTD_save [protected]
stat_filenameSTD_save [protected]
statistics_from_fstat_and_data()StatisticsVector< T >
statistics_from_restart_data(const char *name)MD
StatisticsVector()StatisticsVector< T > [inline]
StatisticsVector(string name)StatisticsVector< T > [inline]
StatisticsVector(StatisticsVector &other)StatisticsVector< T >
StatisticsVector(unsigned int argc, char *argv[])StatisticsVector< T >
statTypeStatisticsVector< T > [private]
STD_save()STD_save [inline]
STD_save(STD_save &other)STD_save [inline]
step_sizeSTD_save [protected]
StressTypeForFixedParticlesStatisticsVector< T > [private]
superexactStatisticsVector< T > [private]
timeAverageStatisticsVector< T > [private]
timeVarianceStatisticsVector< T > [private]
tintStatStatisticsVector< T > [private]
tmaxStatStatisticsVector< T > [private]
tminStatStatisticsVector< T > [private]
verbose()StatisticsVector< T > [inline]
verbosityStatisticsVector< T > [private]
w2StatisticsVector< T > [private]
w_over_rmaxStatisticsVector< T > [private]
wallsStatisticsVector< T > [private]
WallsMD [protected]
WallsPeriodicMD [protected]
write(std::ostream &os)MD [virtual]
write_statistics()StatisticsVector< T >
write_time_average_statistics()StatisticsVector< T >
write_v1(std::ostream &os)MD [virtual]
xmaxStatStatisticsVector< T > [private]
xminStatStatisticsVector< T > [private]
ymaxStatStatisticsVector< T > [private]
yminStatStatisticsVector< T > [private]
zmaxStatStatisticsVector< T > [private]
zminStatStatisticsVector< T > [private]
~MD()MD [inline, virtual]
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